The detailed information of tRNA gene sequence


Sequence ID>W1711395388
Genome IDMETF01000256
Search identical group
Phylum/ClassUnclassified
Speciescandidate division KSB1 bacterium RBG_16_48_16 [METF]
Start position on genome 6850
End posion on genome 6755
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttcagtttc
tRNA gene sequence 
GGGAATGGATGGCTACCTGGTGGGGCCCGCGGTCTTCAAAACCGTTGTGAGGCAGTGTTC
CTGTCTCGGGTGGGTTCGATTCCCACACATTCCCGCaa
Downstream region at tRNA end position 
aagaaccccg
Secondary structure (Cloverleaf model)
>W1711395388	SeC(p)	TCA
                   c      GCaa aagaaccccg
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     G   A          T T
                    A     C A C C C     A
      C C A        T      | | | | |     G
    T       T C G G       G T G G G     C
    G       + | | |                 T T
    G       G G C C
      T G G        C     TGTGAGGCAGTGTTCCTGTCTCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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