The detailed information of tRNA gene sequence


Sequence ID>W1711395392
Genome IDMETF01000264
Search identical group
Phylum/ClassUnclassified
Speciescandidate division KSB1 bacterium RBG_16_48_16 [METF]
Start position on genome 20445
End posion on genome 20355
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttatagaag
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGCTGAACGGGGCGGCCTGCTAAGCCGTTGTAGGGAATTTCTCT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCAA
Downstream region at tRNA end position 
ccgagccaat
Secondary structure (Cloverleaf model)
>W1711395392	Ser	GCT
                   g      GCAA ccgagccaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    C       A C G G
      T G A        G     TGTAGGGAATTTCTCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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