The detailed information of tRNA gene sequence


Sequence ID>W1711397903
Genome IDMEXV01000046
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Amesbacteria bacterium RIFOXYD1_FULL_47_9 [MEXV]
Start position on genome 1528
End posion on genome 1438
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
ggagcactca
tRNA gene sequence 
GGTGGGGTGCAGGAGAGGTTTATCTGCCAGGTCTCGAAAACCTTGGGGGCGCTTTGCGCC
CACGCGAGTTCGAATCTCGCCCCCACCGCCC
Downstream region at tRNA end position 
cgcccctata
Secondary structure (Cloverleaf model)
>W1711397903	Pseudo	CGA
                   a      GCCC cgcccctata
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C T C     A
      A G A        G      | | | | |     G
    G       G G A C       G C G A G     C
    G       + | | |                 T T
    T       T C T G
      T T A        C     GGGGGCGCTTTGCGCCCAC
                    C   T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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