The detailed information of tRNA gene sequence


Sequence ID>W1711399341
Genome IDMFEC01000020
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Daviesbacteria bacterium RIFOXYD1_FULL_41_10 [MFEC]
Start position on genome 5536
End posion on genome 5449
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
tgtaaactag
tRNA gene sequence 
GGAGGAGTGCAAGAGTGGTTTATTTGGCCGGTCTCGAAAACCGAGCGGGTCGCAAGACTC
ACAGAGGTTCAAATCCTCTCTCCTCCGCat
Downstream region at tRNA end position 
cttgacaaaa
Secondary structure (Cloverleaf model)
>W1711399341	Pseudo	CGA
                   g      GCat cttgacaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    G       G A A C       A G A G G     C
    G       + | | |                 T T
    T       T T T G
      T T A        G     GCGGGTCGCAAGACTCAC
                    C   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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