The detailed information of tRNA gene sequence


Sequence ID>W1711401339
Genome IDMFNE01000053
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Lambdaproteobacteria bacterium RIFOXYD2_FULL_50_16 [MFNE]
Start position on genome 116203
End posion on genome 116279
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gaagttttgg
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGTACTTGCTTCGGGAGCAAGGGGTCGGAGGTTCAAC
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
aaacctaata
Secondary structure (Cloverleaf model)
>W1711401339	Pro	CGG
                   g      ACCA aaacctaata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T C
                    T     T C T C C     A
      C G A        A      + | | | |     A
    C       C G C G       G G A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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