The detailed information of tRNA gene sequence


Sequence ID>W1711401704
Genome IDMFQR01000011
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium RIFOXYA2_FULL_44_8 [MFQR]
Start position on genome 19683
End posion on genome 19609
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ggcgcgcagc
tRNA gene sequence 
GCCCCTATAGTTCAATGGATAGAATATCAGGCTTCGAACCTGAAGATGGGAGTTCGATCC
TCTCTGGGGGCACAA
Downstream region at tRNA end position 
aaaaattcgc
Secondary structure (Cloverleaf model)
>W1711401704	Arg	TCG
                   c      ACAA aaaaattcgc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     A - T          C T
                    T     C T C T C     A
      T A A        A      | + | | |     G
    G       C T T G       G G G A G     C
    G       | | | +                 T T
    A       G A A T
      T A          A     AGAT
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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