The detailed information of tRNA gene sequence


Sequence ID>W1711402158
Genome IDMFRE01000015
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium RIFOXYD2_FULL_41_14 [MFRE]
Start position on genome 22244
End posion on genome 22331
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tttttagagc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGCGTCCCTGGAAAGGACGTATGTCGCAAGGCATC
GAGGGTTCAAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
taaaaattat
Secondary structure (Cloverleaf model)
>W1711402158	Ser	GGA
                   c      GCCT taaaaattat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATGTCGCAAGGCATC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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