The detailed information of tRNA gene sequence


Sequence ID>W1711403938
Genome IDMFXE01000003
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peregrinibacteria bacterium RIFOXYA12_FULL_33_12 [MFXE]
Start position on genome 2963
End posion on genome 2874
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttccctcctc
tRNA gene sequence 
GGAGAGATCGCATAGTGGTTTAGTGCGCACGCTTGGAAAGTGTGTAAATCTGCAAAGGTT
TCGGGGGTTCGAATCCCCCTCTCTCCGCCA
Downstream region at tRNA end position 
gataaaatta
Secondary structure (Cloverleaf model)
>W1711403938	Ser	GGA
                   c      GCCA gataaaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G G G G G     C
    G       + | | |                 T T
    T       G T G C
      T T A        G     TAAATCTGCAAAGGTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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