The detailed information of tRNA gene sequence


Sequence ID>W1711404098
Genome IDMFXI01000028
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peregrinibacteria bacterium RIFOXYB12_FULL_41_12 [MFXI]
Start position on genome 15160
End posion on genome 15249
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
gtcgcagtac
tRNA gene sequence
GGAGAGGTGGCAGAGCGGTTGAACGCGGCGGTCTTGAAAACCGTTAGACCCCTCGGGGTC
TCGTGAGTTCGAATCTCACCCTCTCCGCCA
Downstream region at tRNA end position
gttatgttgc
Secondary structure (Cloverleaf model)
>W1711404098	Ser	TGA
                   c      GCCA gttatgttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G           | |                 T T
    T       A C G C
      T G A        G     TAGACCCCTCGGGGTCTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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