The detailed information of tRNA gene sequence


Sequence ID>W1711405169
Genome IDMGBI01000046
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Roizmanbacteria bacterium RIFOXYA2_FULL_41_8 [MGBI]
Start position on genome 1166
End posion on genome 1079
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position
ctagattact
tRNA gene sequence
GGAGGGGTGCCAGAGTGGACGATTGGGCTAATCTCGAAAATTAGTAAGGTTGAAAGATCT
TCGCGGGTTCGAATCCCGCCCCCTCCGCac
Downstream region at tRNA end position
acaccacacc
Secondary structure (Cloverleaf model)
>W1711405169	Pseudo	CGA
                   t      GCac acaccacacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TAAGGTTGAAAGATCTTC
                    C - G
                    T - A
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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