The detailed information of tRNA gene sequence


Sequence ID>W1711405362
Genome IDMGBO01000007
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Roizmanbacteria bacterium RIFOXYC1_FULL_41_16 [MGBO]
Start position on genome 63440
End posion on genome 63527
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
ctagattact
tRNA gene sequence 
GGAGGGGTGCCAGAGTGGACGATTGGGCTAATCTCGAAAATTAGTAAGGTTGAAAGATCT
TCGCGGGTTCGAATCCCGCCCCCTCCGCac
Downstream region at tRNA end position 
acaccacacc
Secondary structure (Cloverleaf model)
>W1711405362	Pseudo	CGA
                   t      GCac acaccacacc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G C G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TAAGGTTGAAAGATCTTC
                    C - G
                    T - A
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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