The detailed information of tRNA gene sequence


Sequence ID>W1711405922
Genome IDMGDL01000025
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Shapirobacteria bacterium RIFOXYB1_FULL_38_38 [MGDL]
Start position on genome 202
End posion on genome 287
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
ccactcgcaa
tRNA gene sequence 
GGAAGGTTGCGGCGAATGGTAAGCCACGGGTTTGCTAAACCCGCGTCCGAAAGGGCATGT
GGGTTCGACTCCCACACCTTCCGCCT
Downstream region at tRNA end position 
acgttcgccg
Secondary structure (Cloverleaf model)
>W1711405922	Pseudo	GCT
                   a      GCCT acgttcgccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     T - A          T C
                    T     C A C C C     A
      A A G        G      | | | | |     G
    T       C G G C       G T G G G     C
    G           |                   T T
    G       A G C C
      T A          A     CGTCCGAAAGGGCAT
                    C - G
                    G - C
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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