The detailed information of tRNA gene sequence


Sequence ID>W1711405960
Genome IDMGDM01000039
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Shapirobacteria bacterium RIFOXYC1_FULL_38_24 [MGDM]
Start position on genome 10388
End posion on genome 10314
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaaaaattt
tRNA gene sequence 
AGGCCCATAGTGAAATGGCTATCACCAAGGTCTCCAAAACCTTTATTTGAGGTTCGAATC
CTCATGGGCCTGCCT
Downstream region at tRNA end position 
acgctaaagc
Secondary structure (Cloverleaf model)
>W1711405960	Trp	CCA
                   t      GCCT acgctaaagc
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     A C T C C     A
      T A A        A      | | | | |     G
    G       A G T G       T G A G G     C
    G       | | | |                 T T
    C       T C A C
      T A          C     TATT
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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