The detailed information of tRNA gene sequence


Sequence ID>W1711405961
Genome IDMGDM01000046
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Shapirobacteria bacterium RIFOXYC1_FULL_38_24 [MGDM]
Start position on genome 2179
End posion on genome 2093
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tataccaacc
tRNA gene sequence 
GGAGGGTTGGCCGAGCGGTTCATGGCGCTGGTTTTGAAAACCAGTGGGAGAAATCCCTCG
GGGGTTCGAATCCCTCACCCTCCGCCT
Downstream region at tRNA end position 
acgcccgcca
Secondary structure (Cloverleaf model)
>W1711405961	Ser	TGA
                   c      GCCT acgcccgcca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      T C A        G     TGGGAGAAATCCCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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