The detailed information of tRNA gene sequence


Sequence ID>W1711406172
Genome IDMGFD01000011
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Uhrbacteria bacterium RIFOXYB2_FULL_45_11 [MGFD]
Start position on genome 5573
End posion on genome 5500
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgttaccat
tRNA gene sequence 
AGGGGCGTCGTTCAATGGTAGGACGAAGGTTTCCAAAACCTTTGACGTGGGTTCGATTCC
CTCCGCCCCTGCCA
Downstream region at tRNA end position 
cgtcgctcgc
Secondary structure (Cloverleaf model)
>W1711406172	Trp	CCA
                   t      GCCA cgtcgctcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C T C C C     A
        A A        C      |   | | |     G
      T     C T T G       G T G G G     C
      G     | + | |                 T T
      G     G G A C
        T A        G     TGAC
                    A - T
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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