The detailed information of tRNA gene sequence


Sequence ID>W1711414418
Genome IDMGZL01000076
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesGeobacteraceae bacterium GWC2_58_44 [MGZL]
Start position on genome 15558
End posion on genome 15655
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ctctaagctt
tRNA gene sequence 
GGAAGCACAATCATCGCTGGTGGGTGGCCCGGTCTTCAAAACCGGTGAGGGGGGTGAGAA
ACTTCCCTGGTGGGTTCGATTCCCATGTGCTTCCGCCA
Downstream region at tRNA end position 
ttcaacattt
Secondary structure (Cloverleaf model)
>W1711414418	SeC(p)	TCA
                   t      GCCA ttcaacattt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    A     T A C C C     A
      C G C        A      + | | | |     G
    T       T A C T       G T G G G     C
    G       + | | +                 T T
    G       G T G G
      T G G        C     TGAGGGGGGTGAGAAACTTCCCTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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