The detailed information of tRNA gene sequence


Sequence ID>W1711416364
Genome IDMHCP01000015
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Woykebacteria bacterium RBG_13_40_15 [MHCP]
Start position on genome 11266
End posion on genome 11177
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctcgggctt
tRNA gene sequence 
GGAGGAGTCGCATAGTTGGTCCAGTGCACAGGTTTGCTAAACCTGCGAGCCGAGAGGCTC
ACGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ggacgtaaaa
Secondary structure (Cloverleaf model)
>W1711416364	Ser	GCT
                   t      GCCA ggacgtaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G T G G G     C
  G         + | | |                 T T
  T         G T G C
    C C A          A     CGAGCCGAGAGGCTCAC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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