The detailed information of tRNA gene sequence


Sequence ID>W1711417145
Genome IDMHEW01000006
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium RIFOXYA2_FULL_44_9 [MHEW]
Start position on genome 60155
End posion on genome 60244
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aagtgatgtt
tRNA gene sequence 
GGAGAGGTGCCAGAGAGGCTGAATGGGGCGGTCTCGAAAACCGTTGTGGGGGCAACTTCA
CCGGGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gttagtaagt
Secondary structure (Cloverleaf model)
>W1711417145	Ser	CGA
                   t      GCCA gttagtaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | + | | |     A
    G       G A C C       G G G G G     C
    G         | | |                 T T
    C       A T G G
      T G A        G     TGTGGGGGCAACTTCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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