The detailed information of tRNA gene sequence


Sequence ID>W1711417151
Genome IDMHEW01000011
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium RIFOXYA2_FULL_44_9 [MHEW]
Start position on genome 46394
End posion on genome 46305
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcttttcatt
tRNA gene sequence 
GGAGGGGTGGCTGAGCGGTTGAAGGCGACGGTCTTGAAAATCGTTGTAGGGGCAACTCTA
CCGTGAGTTCGAATCTCACCCCCTCCGCCA
Downstream region at tRNA end position 
gttaggcaac
Secondary structure (Cloverleaf model)
>W1711417151	Ser	TGA
                   t      GCCA gttaggcaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G A G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TGTAGGGGCAACTCTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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