The detailed information of tRNA gene sequence


Sequence ID>W1711419163
Genome IDMHMO01000011
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Nealsonbacteria bacterium RIFOXYD1_FULL_39_11 [MHMO]
Start position on genome 11378
End posion on genome 11467
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctccactat
tRNA gene sequence 
GGAGACGTGCGAGAGTGGTTGAATCGGACAGTTTCGAAAACTGTTATGGCCGAAAGGTCA
TCGAAGGTTCGAATCCTTCCGTCTCCGCCA
Downstream region at tRNA end position 
attttcgctt
Secondary structure (Cloverleaf model)
>W1711419163	Ser	CGA
                   t      GCCA attttcgctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | | | | |     G
    G       G A G C       G A A G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TATGGCCGAAAGGTCATC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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