The detailed information of tRNA gene sequence


Sequence ID>W1711419217
Genome IDMHMT01000020
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Portnoybacteria bacterium RBG_13_40_8 [MHMT]
Start position on genome 23000
End posion on genome 22916
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtccaccaga
tRNA gene sequence 
GGAGAGTTGGCAGAATGGTAATGCGCTCGCCTCGAAAGCGAGTGGCCGCAAGGCCTTGCA
GGTTCGAGCCCTGCACTCTCCGCAA
Downstream region at tRNA end position 
cgtaataaat
Secondary structure (Cloverleaf model)
>W1711419217	Ser	CGA
                   a      GCAA cgtaataaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          C G
                    T     C G T C C     A
        A A        G      | | | | |     G
      T     G A C G       G C A G G     C
      G       | | |                 T T
      G     A T G C
        T A        G     TGGCCGCAAGGCCTT
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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