The detailed information of tRNA gene sequence


Sequence ID>W1711419762
Genome IDMHPV01000016
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_110 [MHPV]
Start position on genome 52811
End posion on genome 52889
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
aataatttat
tRNA gene sequence
GCGGGCATAGTCCAGCCTGGTTCAAGACGCCTCCCTGTCACGGAGGAGATCGGGGGTTCA
AATCCCCCTGCCCGCGCCA
Downstream region at tRNA end position
ctgtgaacga
Secondary structure (Cloverleaf model)
>W1711419762	Asp	GTC
                   t      GCCA ctgtgaacga
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     C C C C C     A
    C C G A        A      | | | | |     A
  T         C C T G       G G G G G     C
  G           | | |                 T T
  G         A G A C
    T T C A        G     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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