The detailed information of tRNA gene sequence


Sequence ID>W1711419796
Genome IDMHPW01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Staskawiczbacteria bacterium RIFOXYD1_FULL_37_73 [MHPW]
Start position on genome 38186
End posion on genome 38112
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tataaaatat
tRNA gene sequence
GGGGGTGTGGTGAAACCGGTATCATAGGAATCTCCAAAATTTCTGTTCCTGGTTCGAGTC
CAGGCGCCCCCGCCT
Downstream region at tRNA end position
tcgcctcgcc
Secondary structure (Cloverleaf model)
>W1711419796	Trp	CCA
                   t      GCCT tcgcctcgcc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     G G A C C     A
      C A A        G      | | | | |     G
    C       A G T G       C C T G G     C
    G       | | | +                 T T
    G       T C A T
      T A          A     TGTT
                    G - C
                    G + T
                    A - T
                    A - T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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