The detailed information of tRNA gene sequence


Sequence ID>W1711420210
Genome IDMHTJ01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Vogelbacteria bacterium RIFOXYD1_FULL_44_32 [MHTJ]
Start position on genome 158361
End posion on genome 158274
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctttcgtgc
tRNA gene sequence 
GGAGGGGTGGCAGAGAGGCCGATCGCGCTTGTCTTGAAAACAAGAGTCTCGGTAACGGGA
CCGTGGGTTCGAATCCCACCCCCTCCGCac
Downstream region at tRNA end position 
ggaagataat
Secondary structure (Cloverleaf model)
>W1711420210	Ser	TGA
                   c      GCac ggaagataat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       +   | |                 T T
    C       T C G C
      C G A        G     AGTCTCGGTAACGGGACC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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