The detailed information of tRNA gene sequence


Sequence ID>W1711573228
Genome IDMNCR01000135
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Rokubacteria bacterium 13_2_20CM_69_15_1 [MNCR]
Start position on genome 8835
End posion on genome 8764
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atggcgcaga
tRNA gene sequence 
GGGCCCATAGCTCAATGGCAGAGCAGCCGGCTCATAACCGGTTAGATCTTGGTTCGAGTC
CAGGTGGGCCCAgta
Downstream region at tRNA end position 
ttgtcgcggg
Secondary structure (Cloverleaf model)
>W1711573228	Met	CAT
                   a      Agta ttgtcgcggg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
        A A        A      | + | | |     G
      T     C T C G       C T T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TAGAT
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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