The detailed information of tRNA gene sequence


Sequence ID>W1711574713
Genome IDMNGA01000274
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Rokubacteria bacterium 13_1_40CM_3_69_38 [MNGA]
Start position on genome 11467
End posion on genome 11564
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
cgttcgtatc
tRNA gene sequence
GGAAGCGTCTAGGAACCCGGTGGGCCTCCCGGACTTCAAATCCGGTGGACCGTTCTAGAC
AAACGGTCGATGGGTTCGACTCCCATACGCTTCCGCCA
Downstream region at tRNA end position
ggagactcat
Secondary structure (Cloverleaf model)
>W1711574713	SeC(p)	TCA
                   c      GCCA ggagactcat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    C     T A C C C     A
      C C A        T      | | | | |     G
    C       A G G A       A T G G G     C
    G         | | |                 T T
    G       G C C T
      T G G        C     TGGACCGTTCTAGACAAACGGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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