The detailed information of tRNA gene sequence


Sequence ID>W1711574863
Genome IDMNGQ01000006
Search identical group
Phylum/ClassChloroflexota
SpeciesChloroflexi bacterium 13_1_40CM_3_65_12 [MNGQ]
Start position on genome 1500
End posion on genome 1422
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttccgccgtc
tRNA gene sequence 
GGTCCCGTGGTGTAGCCTGGCCAAACACGCGGCCCTGTCAAGGCCGAGAACGCCGGTTCG
AATCCGGTCGGGACCGCCA
Downstream region at tRNA end position 
tttaggctcc
Secondary structure (Cloverleaf model)
>W1711574863	Asp	GTC
                   c      GCCA tttaggctcc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
    C C G A        G      + | | | |     G
  T         T G T G       G C C G G     C
  G         | | | |                 T T
  G         A C A C
    C C A A        G     AGAAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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