The detailed information of tRNA gene sequence


Sequence ID>W1711575046
Genome IDMNHC01000020
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Rokubacteria bacterium 13_1_40CM_2_68_13 [MNHC]
Start position on genome 12516
End posion on genome 12441
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
cccggcggat
tRNA gene sequence
GGACGATTAGCTCAGTTGGCAGAGCGCTGGCCTCACATGCCAGAGGTCACTGGTTCAAGT
CCAGTATCGTCCACCA
Downstream region at tRNA end position
ttcccccttc
Secondary structure (Cloverleaf model)
>W1711575046	Val	CAC
                   t      ACCA ttcccccttc
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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