The detailed information of tRNA gene sequence


Sequence ID>W1711575065
Genome IDMNHD01000332
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium 13_1_40CM_2_62_10 [MNHD]
Start position on genome 8210
End posion on genome 8121
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgttggcgc
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGCCGATTCGGCGTGCCTGGAGAGCACGTGTGCTGGCAACGGCA
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gcttggcgcg
Secondary structure (Cloverleaf model)
>W1711575065	Ser	GGA
                   c      GCCA gcttggcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     A
    G       G A G C       G T G G G     C
    G       + | | |                 T T
    C       T T C G
      C G A        G     TGTGCTGGCAACGGCACC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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