The detailed information of tRNA gene sequence


Sequence ID>W1711576096
Genome IDMNKK01000116
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium 13_1_20CM_2_68_7 [MNKK]
Start position on genome 8167
End posion on genome 8264
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
cgatgatcga
tRNA gene sequence 
GGAAGCGCATCGGGGCTGGTGTCCTGCGCGGACTTCAAATCCGTTGGGAGCCGGGGGAAC
CCGGCTCCGGTGGGTTCGATTCCCACACGCTTCCGCCA
Downstream region at tRNA end position 
atcctccgga
Secondary structure (Cloverleaf model)
>W1711576096	SeC(p)	TCA
                   a      GCCA atcctccgga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C   A          T T
                    A     C A C C C     A
      T C G        T      | | | | |     G
    G       G G G C       G T G G G     C
    G       | | + |                 T T
    T       C C T G
      G T          C     TGGGAGCCGGGGGAACCCGGCTCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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