The detailed information of tRNA gene sequence


Sequence ID>W1711582220
Genome IDMNVC01000018
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium CG1_02_32_51 [MNVC]
Start position on genome 4574
End posion on genome 4485
Amino Acid Ser
Anticodon ACT
Upstream region at tRNA start position 
taatttatag
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGATAGCAACAGTTTACTAAACTGTCGTCCCTGAAAGGGGA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCT
Downstream region at tRNA end position 
gcgcctcgct
Secondary structure (Cloverleaf model)
>W1711582220	Ser	ACT
                   g      GCCT gcgcctcgct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G       + | | |                 T T
    T       T A G C
      C G A        A     CGTCCCTGAAAGGGGACC
                    A - T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    A C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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