The detailed information of tRNA gene sequence


Sequence ID>W1711582454
Genome IDMNVP01000027
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Omnitrophica bacterium CG1_02_40_15 [MNVP]
Start position on genome 9607
End posion on genome 9696
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatagaatac
tRNA gene sequence 
GGAGAGGTCGCGTAGCCCGGTTTAGCGCGCATGCCTGGAGAGCATGTGTACCGAAAGGTA
CCCAGGGTTCGAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
tgaaccatat
Secondary structure (Cloverleaf model)
>W1711582454	Ser	GGA
                   c      GCCA tgaaccatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
    C C G A        C      | | | | |     G
  C         T G C G       C A G G G     C
  G         + | | |                 T T
  G         G C G C
    T T T A        G     TGTACCGAAAGGTACC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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