The detailed information of tRNA gene sequence


Sequence ID>PL171000160
Genome IDAP018231
Search identical group
Phylum/ClassCyanobacteria
SpeciesCalothrix parasitica NIES-267 plasmid:plasmid4
Start position on genome 3954
End posion on genome 3878
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tctgcgttat
tRNA gene sequence 
GGTGCCGTAGGCAAATTGGTTAAGCCGTCTGTCTTTCAAGCAGGAGATTGCGGGTTCAAG
CCCCGTCGGCACTGCCT
Downstream region at tRNA end position 
tatgggttgg
Secondary structure (Cloverleaf model)
>PL171000160	Glu	TTC
                   t      GCCT tatgggttgg
                     G + T
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     G - C          C G
                    T     T G C C C     A
      T A A        A      + | | | |     A
    T       A C G G       G C G G G     C
    G         | | |                 T T
    G       A G C C
      T T A        G     AGATT
                    T + G
                    C - G
                    T - A
                    G - C
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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