The detailed information of tRNA gene sequence


Sequence ID>PL171000209
Genome IDAY596295
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloarcula marismortui ATCC 43049 plasmid:pNG600
Start position on genome 50860
End posion on genome 50782
Amino Acid Pseudo
Anticodon CTC
Upstream region at tRNA start position 
agttgaagcT
tRNA gene sequence 
GCTCCGTTGGTGTAGCTCGGCCAACCATCTCGGCATCTCACGTCGAGGACCGAGGTTCAA
ATCCTCGACGGAGCATCC
Downstream region at tRNA end position 
ccgatctgat
Secondary structure (Cloverleaf model)
>PL171000209	Pseudo	CTC
                   T      ATCC ccgatctgat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     G C T C C     A
    T C G A        G      | | | | |     A
  C         T G T G       C G A G G     C
  G           | | +                 T T
  G         C C A T
    C C A A        C     GGAC
                    T - A
                    C - G
                    G - C
                    G + T
                    C - G
                  A       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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