The detailed information of tRNA gene sequence


Sequence ID>PL171000249
Genome IDCP000533
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPolaromonas naphthalenivorans CJ2 plasmid:pPNAP04
Start position on genome 112170
End posion on genome 112094
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcgaaatttc
tRNA gene sequence 
CGCGCGGTGGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGTAAGTTCAAA
TCTTGCCCGCGCAACCA
Downstream region at tRNA end position 
agacaaaagc
Secondary structure (Cloverleaf model)
>PL171000249	Met	CAT
                   c      ACCA agacaaaagc
                     C   A
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G T T C     A
      C G A        G      | + | | |     A
    C       C G A G       G T A A G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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