The detailed information of tRNA gene sequence


Sequence ID>PL171000257
Genome IDCP000556
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesMethylibium petroleiphilum PM1 plasmid:RPME01
Start position on genome 245239
End posion on genome 245325
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tcatcaccat
tRNA gene sequence 
CTCGACGTAGCCAAGTTGGCCGAAGGCACCTGGTTGCAACCCAGGCGGCGAAAGCCCGCA
TCCGTTCGAATCGGATCGTCGAGTCCA
Downstream region at tRNA end position 
ccacacaaga
Secondary structure (Cloverleaf model)
>PL171000257	Cys	GCA
                   t      TCCA ccacacaaga
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T A G G C     A
    T T G A        A      | | | | |     G
  G         A C C G       A T C C G     C
  G           | | |                 T T
  C         A G G C
    C G A          A     CGGCGAAAGCCCGC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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