The detailed information of tRNA gene sequence


Sequence ID>PL171000282
Genome IDCP000662
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhodobacter sphaeroides ATCC 17025 plasmid pRSPA01
Start position on genome 722704
End posion on genome 722780
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcaaaacggc
tRNA gene sequence 
CGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGCCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
aattactccg
Secondary structure (Cloverleaf model)
>PL171000282	Met	CAT
                   c      ACCA aattactccg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGCC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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