The detailed information of tRNA gene sequence


Sequence ID>PL171000381
Genome IDCP002214
Search identical group
Phylum/ClassFirmicutes
SpeciesPaenibacillus polymyxa SC2 plasmid:pSC2
Start position on genome 6602
End posion on genome 6678
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aatatcatgt
tRNA gene sequence 
GGCTCCTTTGACAAACGGGTTAAGTCACCAGACTTTCAATCTGGTCAGTGCAGGTTCGAG
TCCTGTCGGAGTCGCCA
Downstream region at tRNA end position 
tatatgcgga
Secondary structure (Cloverleaf model)
>PL171000381	Glu	TTC
                   t      GCCA tatatgcgga
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     T   C          T G
                    T     T G T C C     A
      C A A        T      + | | | |     G
    G       A C A G       G C A G G     C
    G         | | |                 T T
    G       A G T C
      T T A        A     TCAGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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