The detailed information of tRNA gene sequence


Sequence ID>PL171000468
Genome IDCP002880
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus necator N-1 plasmid:pBB2
Start position on genome 278924
End posion on genome 279000
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccacgcaa
tRNA gene sequence 
GGGCCGGAAGCTTAAGTGGTATAAGCCGTCGACTCATAATCGACTGATAGTGGGTTCGAG
TCCCACCCCGCCCACCA
Downstream region at tRNA end position 
ataataatgg
Secondary structure (Cloverleaf model)
>PL171000468	Met	CAT
                   a      ACCA ataataatgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C   C
                     G - C
                     G - C          T G
                    A     C A C C C     A
      G A A        A      | | | | |     G
    T       T T C G       G T G G G     C
    G       | | | |                 T T
    G       A A G C
      T A T        C     TGATA
                    G - C
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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