The detailed information of tRNA gene sequence


Sequence ID>PL171000510
Genome IDCP003298
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEscherichia coli O104:H4 str. 2009EL-2050 plasmid:p09EL50
Start position on genome 83418
End posion on genome 83343
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccaccaaatt
tRNA gene sequence 
GCCGATTTAGCTCAGTTGGTAGAGCAGTCGCTTTGTAAGCGAATGGTCATCGGTTCGATC
CCGTTAATCGGCACCA
Downstream region at tRNA end position 
acataatatt
Secondary structure (Cloverleaf model)
>PL171000510	Thr	TGT
                   t      ACCA acataatatt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     T - A          C T
                    T     T T G C C     A
      T G A        A      |   | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G   A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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