The detailed information of tRNA gene sequence


Sequence ID>PL171000840
Genome IDCP011520
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesPandoraea oxalativorans DSM 23570 plasmid:pPO70-3
Start position on genome 26303
End posion on genome 26378
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
ggggcgaacc
tRNA gene sequence 
GGGCCGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCACTGGTTCGAAT
CCAGTACGGCCTACCC
Downstream region at tRNA end position 
ctgtgtacac
Secondary structure (Cloverleaf model)
>PL171000840	Lys	TTT
                   c      ACCC ctgtgtacac
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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