The detailed information of tRNA gene sequence


Sequence ID>PL171000980
Genome IDCP013615
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium perfringens JP838 plasmid:pJFP838A
Start position on genome 376410
End posion on genome 376503
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaaaatatat
tRNA gene sequence 
GGAGAGTTGGTAGAGTGGTTTAATACAGCAGTTTGCTAAACTGTCAGTCATTTTAAATAG
TGGCTCAAGGGTTCAAATCCCTTACTCTCCTCCA
Downstream region at tRNA end position 
ttcatcatta
Secondary structure (Cloverleaf model)
>PL171000980	Ser	GCT
                   t      TCCA ttcatcatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T T C C C     A
      T G A        G      | | | | |     A
    G       G A T G       A A G G G     C
    G         | | |                 T T
    T       A T A C
      T T A        A     CAGTCATTTTAAATAGTGGCTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK