The detailed information of tRNA gene sequence


Sequence ID>PL171000983
Genome IDCP013615
Search identical group
Phylum/ClassFirmicutes
SpeciesClostridium perfringens JP838 plasmid:pJFP838A
Start position on genome 376995
End posion on genome 377068
Amino Acid Pseudo
Anticodon AAA
Upstream region at tRNA start position 
cggtaactat
tRNA gene sequence 
GGAAAGTTAGCTTAATGTGGGCAAAGCGTTTAATTAAAGATTAAAAGAAGTGAGTTCAAA
TCTTACACTTTCCTtga
Downstream region at tRNA end position 
tatatagcag
Secondary structure (Cloverleaf model)
>PL171000983	Pseudo	AAA
                   t      Ttga tatatagcag
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     C A T T C     A
    G T A A        A      | | + | |     A
  T         T T C G       G T G A G     C
  G         | | | |                 T T
  G         A A G C
    G C A          G     AGAA
                    T - A
                    T - A
                    T - A
                    A - T
                    A - T
                  T       A
                  T       G
                    A A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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