The detailed information of tRNA gene sequence


Sequence ID>PL171001007
Genome IDCP014801
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesThiobacimonas profunda JLT2016 plasmid:pTPRO5
Start position on genome 81565
End posion on genome 81480
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gaggcaccac
tRNA gene sequence 
GCGGACATGGTGGAATGGTAGACACCGGAGACTTAAAATCTCCTGCTCAATCGAGCGTGC
GGGTTCGAGTCCCGCTGTCCGCACCA
Downstream region at tRNA end position 
gaatcggccc
Secondary structure (Cloverleaf model)
>PL171001007	Leu	TAA
                   c      ACCA gaatcggccc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       G G T G       G C G G G     C
    G         | | |                 T T
    T       A C A C
      A G          C     TGCTCAATCGAGCGT
                    G - C
                    G - C
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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