The detailed information of tRNA gene sequence


Sequence ID>PL171001192
Genome IDCP016005
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia sp. KK1 plasmid:pkk4
Start position on genome 141293
End posion on genome 141385
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gtccgcacat
tRNA gene sequence 
GGAGGTGTGGCAGAGCGGGTTAATGCACCGGCCTTGAAATCCGGCGAAGGGGCGTCCCCC
CTTCCGTGAGTTCGAATCTCACCGCCTCCACCA
Downstream region at tRNA end position 
gttcaccccc
Secondary structure (Cloverleaf model)
>PL171001192	Ser	TGA
                   t      ACCA gttcaccccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    G       A T G C
      T T A        A     CGAAGGGGCGTCCCCCCTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C   T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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