The detailed information of tRNA gene sequence


Sequence ID>PL171001821
Genome IDLN868939
Search identical group
Phylum/ClassActinobacteria
SpeciesNocardia farcinica NCTC11134 plasmid:2
Start position on genome 511508
End posion on genome 511423
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcggggcact
tRNA gene sequence 
GGAGACGTGGCAGAGCGGCCGATTGCACTCGCCTTGAAAGCGAGCGTCGCGAGAGCGACC
GGGGGTTCAAATCCCTCCGTCTCCGCtc
Downstream region at tRNA end position 
acttttcccc
Secondary structure (Cloverleaf model)
>PL171001821	Ser	TGA
                   t      GCtc acttttcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    C       T T G C
      C G A        A     CGTCGCGAGAGCGACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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