The detailed information of tRNA gene sequence


Sequence ID>PL173000071
Genome IDCP002880
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCupriavidus necator N-1 plasmid:pBB2
Start position on genome 284381
End posion on genome 284459
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccttccaatt
tRNA gene sequence 
GGGCCTCTAGCTCATGCTTCGTTAAAGCAGCGGACTCATAATCCGTTGCTGCCGTGTTCG
CCTCACGGGAGGCCCACCA
Downstream region at tRNA end position 
tgcaaccatt
Secondary structure (Cloverleaf model)
>PL173000071	Met	CAT
                   t      ACCA tgcaaccatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G          T C
                    T     G G C A C     C
    C G T A        A      | | | | |     G
  T         C T C G       C C G T G     C
  T           | | |                 T T
  C         A A G C
    G T T A        A     TGCTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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