The detailed information of tRNA gene sequence


Sequence ID>A171000003
Genome IDAM774415
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium salinarum R1 DSM 671 [AM774415]
Start position on genome 181259
End posion on genome 181344
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tatcgaacga
tRNA gene sequence 
GCCGAGGTAGCCTAGCCTGGCCAAGGCGGTTGCTTCGAGAGCAACTGTCCACACGGACTC
AGGAGTTCAAATCTCCTCCTCGGCGCtt
Downstream region at tRNA end position 
ctcggaccac
Secondary structure (Cloverleaf model)
>A171000003	Ser	CGA
                   a      GCtt ctcggaccac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C T C     A
    C C G A        A      | | | | |     A
  T         T C C G       A G G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCACACGGACTC
                    G - C
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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