The detailed information of tRNA gene sequence


Sequence ID>A171000034
Genome IDAM774415
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalobacterium salinarum R1 DSM 671 [AM774415]
Start position on genome 912347
End posion on genome 912264
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgtcgtgtac
tRNA gene sequence 
GGTGAGGTGGCAGAGCGGCCTATTGCGCCGGTCTTGAAAACCGGTGGCGTCACGCCTCCT
GGGTTCGAATCCCAGCCTCACCGCtt
Downstream region at tRNA end position 
ctcgacgtcc
Secondary structure (Cloverleaf model)
>A171000034	Ser	TGA
                   c      GCtt ctcgacgtcc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C T A        G     TGGCGTCACGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.-

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