The detailed information of tRNA gene sequence


Sequence ID>A171000045
Genome IDAP011532
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocella paludicola SANAE [AP011532]
Start position on genome 152548
End posion on genome 152624
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tttgtgtctt
tRNA gene sequence 
GGGCCCGTGGCTCAGTCAGGCAGAGCGGCGGACTCTTAATCCGCATGCCATGGGTTCAAA
TCCCATCGGGCCCGCCA
Downstream region at tRNA end position 
cactatcctt
Secondary structure (Cloverleaf model)
>A171000045	Lys	CTT
                   t      GCCA cactatcctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     A
    C       C T C G       A T G G G     C
    A       | | | |                 T T
    G       G A G C
      G C A        G     ATGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.-

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